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Noca_2223 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2223" - Type II secretion system protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2223Type II secretion system protein (310 aa)    
Predicted Functional Partners:
Noca_2224
Type II secretion system protein (303 aa)
 
          0.971
Noca_2221
Hypothetical protein (279 aa)
 
          0.971
Noca_2220
SAF domain-containing protein (224 aa)
 
          0.970
Noca_2222
Type II secretion system protein E (559 aa)
 
          0.968
Noca_2229
Peptidoglycan-binding LysM (1086 aa)
 
          0.946
Noca_2227
TadE family protein (152 aa)
 
          0.943
Noca_2232
Putative atp/GTP-binding protein (299 aa)
 
          0.936
Noca_1548
Peptidoglycan-binding LysM (1051 aa)
 
          0.856
Noca_1546
TadE family protein (137 aa)
   
          0.778
Noca_1543
Type II secretion system protein (300 aa)
   
          0.778
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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