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Noca_2246 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2246" - Type IV secretory pathway VirD4 components-like protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2246Type IV secretory pathway VirD4 components-like protein (506 aa)    
Predicted Functional Partners:
Noca_2243
ATP-binding protein (512 aa)
 
          0.904
Noca_2242
Hypothetical protein (501 aa)
 
          0.903
Noca_2247
Hypothetical protein (233 aa)
              0.863
Noca_1572
ATP-binding protein (496 aa)
 
          0.862
Noca_2248
Hypothetical protein (118 aa)
              0.859
Noca_1576
Type IV secretory pathway VirD4 components-like protein (453 aa)
   
   
 
0.805
Noca_2250
DNA primase catalytic core (1976 aa)
 
          0.782
Noca_1580
DNA primase catalytic core (1797 aa)
 
          0.781
Noca_1571
Hypothetical protein (502 aa)
   
          0.778
Noca_2229
Peptidoglycan-binding LysM (1086 aa)
   
          0.774
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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