STRINGSTRING
Noca_2305 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2305" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2305Hypothetical protein (149 aa)    
Predicted Functional Partners:
Noca_2304
Dihydrolipoamide dehydrogenase (459 aa)
              0.779
Noca_2303
2-oxoglutarate dehydrogenase E2 component (597 aa)
              0.715
Noca_0656
Hypothetical protein (299 aa)
   
          0.707
Noca_1519
Hypothetical protein (249 aa)
   
          0.684
Noca_2302
NAD-dependent epimerase/dehydratase (298 aa)
              0.641
Noca_1223
Hypothetical protein (163 aa)
   
          0.592
Noca_4611
Hypothetical protein (152 aa)
   
          0.590
Noca_1385
Hypothetical protein (229 aa)
   
          0.589
Noca_4669
Hypothetical protein (811 aa)
   
          0.562
Noca_1370
Regulatory protein MarR (164 aa)
   
          0.558
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (13%) [HD]