Genes that are sometimes fused into single open reading frames.
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Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
colored nodes: query proteins and first shell of interactors
white nodes: second shell of interactors
empty nodes: proteins of unknown 3D structure
filled nodes: some 3D structure is known or predicted
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
from curated databases
PhzF family phenazine biosynthesis protein (273 aa)
Predicted Functional Partners:
Thymidylate synthase; Provides the sole de novo source of dTMP for DNA biosynthesis (273 aa)
Hypothetical protein (515 aa)
Dihydrofolate reductase; Key enzyme in folate metabolism. Catalyzes an essential reaction for de novo glycine and purine synthesis, and for DNA precursor synthesis (160 aa)
Luciferase family protein (316 aa)
Glycine cleavage system aminomethyltransferase T; The glycine cleavage system catalyzes the degradation of glycine (371 aa)
Hypothetical protein (86 aa)
B12-dependent methionine synthase (1244 aa)
Leucyl aminopeptidase; Presumably involved in the processing and regular turnover of intracellular proteins. Catalyzes the removal of unsubstituted N-terminal amino acids from various peptides (497 aa)
Diaminopimelate decarboxylase; Specifically catalyzes the decarboxylation of meso- diaminopimelate (meso-DAP) to L-lysine (466 aa)
Pyridoxamine 5’-phosphate oxidase; Catalyzes the oxidation of either pyridoxine 5’- phosphate (PNP) or pyridoxamine 5’-phosphate (PMP) into pyridoxal 5’-phosphate (PLP) (213 aa)
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162 Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614