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rimO protein (Nocardioides sp. JS614) - STRING interaction network
"rimO" - MiaB-like tRNA modifying enzyme YliG in Nocardioides sp. JS614
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query proteins and first shell of interactors
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second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
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[Homology]
Score
rimOMiaB-like tRNA modifying enzyme YliG; Catalyzes the methylthiolation of an aspartic acid residue of ribosomal protein S12 (480 aa)    
Predicted Functional Partners:
Noca_2320
CDP-diacylglycerol--glycerol-3-phosphate 3-phosphatidyltransferase (202 aa)
              0.837
Noca_2317
Cell division protein FtsK (878 aa)
              0.795
Noca_2318
Hypothetical protein (565 aa)
              0.778
Noca_2602
Peptide deformylase; Removes the formyl group from the N-terminal Met of newly synthesized proteins. Requires at least a dipeptide for an efficient rate of reaction. N-terminal L-methionine is a prerequisite for activity but the enzyme has broad specificity at other positions (199 aa)
 
   
  0.691
rlmN
Ribosomal RNA large subunit methyltransferase N; Specifically methylates position 2 of adenine 2503 in 23S rRNA and position 2 of adenine 37 in tRNAs (376 aa)
 
   
  0.642
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (527 aa)
   
   
  0.622
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (345 aa)
     
 
  0.600
Noca_3645
Inosine-5’-monophosphate dehydrogenase (500 aa)
   
        0.598
Noca_2608
Inosine 5-monophosphate dehydrogenase (478 aa)
   
        0.598
pnp
Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (742 aa)
 
        0.594
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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