STRINGSTRING
Noca_2336 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2336" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2336Hypothetical protein (144 aa)    
Predicted Functional Partners:
Noca_2335
Endoribonuclease L-PSP (127 aa)
              0.767
Noca_4408
Hypothetical protein (164 aa)
   
          0.640
Noca_2337
Type 12 methyltransferase (440 aa)
              0.625
Noca_2340
Methylthioadenosine phosphorylase (264 aa)
              0.623
Noca_2339
Major facilitator transporter (421 aa)
              0.623
Noca_2338
Hypothetical protein (64 aa)
              0.623
Noca_0995
Hypothetical protein (201 aa)
   
          0.593
Noca_1385
Hypothetical protein (229 aa)
   
          0.583
Noca_0710
Heat shock protein DnaJ domain-containing protein (270 aa)
   
          0.568
Noca_4463
Major facilitator transporter (449 aa)
   
          0.554
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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