STRINGSTRING
Noca_2354 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2354" - Ribonuclease BN in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2354Ribonuclease BN (327 aa)    
Predicted Functional Partners:
Noca_2355
TrkA domain-containing protein (366 aa)
              0.843
Noca_1336
Putative ribonuclease BN (377 aa)
   
   
    0.770
Noca_2353
acyl-CoA dehydrogenase domain-containing protein (557 aa)
   
        0.692
Noca_2356
PAS sensor protein (668 aa)
   
        0.612
Noca_3123
Hypothetical protein (424 aa)
   
          0.589
Noca_3931
Major facilitator transporter (449 aa)
 
     
  0.547
Noca_4548
Ribonuclease BN (349 aa)
   
   
    0.527
Noca_3929
Integral membrane protein (78 aa)
   
          0.526
Noca_2015
Phosphoglycerate mutase (401 aa)
       
    0.509
Noca_3128
Hypothetical protein (601 aa)
       
  0.498
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (10%) [HD]