STRINGSTRING
Noca_2396 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2396" - Beta-lactamase domain-containing protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2396Beta-lactamase domain-containing protein (237 aa)    
Predicted Functional Partners:
Noca_2397
histidyl-tRNA synthetase (451 aa)
   
        0.882
aspS
aspartyl-tRNA synthetase; Aspartyl-tRNA synthetase with relaxed tRNA specificity since it is able to aspartylate not only its cognate tRNA(Asp) but also tRNA(Asn). Reaction proceeds in two steps- aspartate is first activated by ATP to form Asp-AMP and then transferred to the acceptor end of tRNA(Asp/Asn) (590 aa)
              0.878
Noca_2522
Beta-lactamase domain-containing protein (230 aa)
   
          0.774
Noca_2395
Peptidase S1 and S6, chymotrypsin/Hap (556 aa)
              0.638
Noca_2394
Hypothetical protein (409 aa)
              0.577
Noca_2399
Binding-protein-dependent transport system inner membrane protein (336 aa)
              0.522
Noca_2930
Beta-lactamase domain-containing protein (378 aa)
   
          0.473
Noca_2400
Extracellular solute-binding protein (599 aa)
              0.433
Noca_2690
Cyclophilin type peptidyl-prolyl cis-trans isomerase (225 aa)
              0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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