STRINGSTRING
Noca_2402 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2402" - Oligopeptide/dipeptide ABC transporter ATPase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2402Oligopeptide/dipeptide ABC transporter ATPase (347 aa)    
Predicted Functional Partners:
Noca_2403
Oligopeptide/dipeptide ABC transporter ATPase (425 aa)
 
0.997
Noca_2401
Binding-protein-dependent transport systems inner membrane component (338 aa)
  0.994
Noca_2399
Binding-protein-dependent transport system inner membrane protein (336 aa)
  0.984
Noca_4090
Oligopeptide/dipeptide ABC transporter ATPase (358 aa)
 
0.980
Noca_4092
Binding-protein-dependent transport system inner membrane protein (346 aa)
  0.978
Noca_4093
Binding-protein-dependent transport systems inner membrane component (321 aa)
  0.965
Noca_4082
Extracellular solute-binding protein (526 aa)
 
  0.933
Noca_4091
Oligopeptide/dipeptide ABC transporter ATPase (339 aa)
   
   
 
0.912
Noca_2400
Extracellular solute-binding protein (599 aa)
 
          0.897
alaS
alanyl-tRNA synthetase; Catalyzes the attachment of alanine to tRNA(Ala) in a two-step reaction- alanine is first activated by ATP to form Ala- AMP and then transferred to the acceptor end of tRNA(Ala). Also edits incorrectly charged Ser-tRNA(Ala) and Gly-tRNA(Ala) via its editing domain (896 aa)
         
  0.763
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (11%) [HD]