STRINGSTRING
Noca_2420 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2420" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2420Hypothetical protein (278 aa)    
Predicted Functional Partners:
Noca_2419
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (458 aa)
              0.859
nusB
Transcription antitermination factor NusB; Involved in the transcription termination process (135 aa)
              0.731
efp
Elongation factor P; Involved in peptide bond synthesis. Stimulates efficient translation and peptide-bond synthesis on native or reconstituted 70S ribosomes in vitro. Probably functions indirectly by altering the affinity of the ribosome for aminoacyl-tRNA, thus increasing their reactivity as acceptors for peptidyl transferase (187 aa)
              0.731
Noca_2421
Putative signal peptide (439 aa)
              0.570
Noca_2422
Alcohol dehydrogenase (343 aa)
              0.556
Noca_4568
CsbD family protein (64 aa)
   
          0.536
Noca_2843
Hypothetical protein (338 aa)
   
          0.509
Noca_2416
Hypothetical protein (265 aa)
              0.412
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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