STRINGSTRING
Noca_2421 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2421" - Putative signal peptide in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2421Putative signal peptide (439 aa)    
Predicted Functional Partners:
Noca_2422
Alcohol dehydrogenase (343 aa)
              0.834
Noca_0307
Hypothetical protein (451 aa)
   
          0.726
Noca_2467
Hypothetical protein (266 aa)
   
          0.706
Noca_2419
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (458 aa)
 
          0.619
Noca_0468
Hypothetical protein (266 aa)
   
          0.601
Noca_2852
Hypothetical protein (311 aa)
   
          0.589
Noca_0308
Hypothetical protein (482 aa)
 
          0.588
Noca_2344
N-acetyltransferase GCN5 (234 aa)
   
          0.575
Noca_2420
Hypothetical protein (278 aa)
              0.570
Noca_0306
Hypothetical protein (98 aa)
   
          0.536
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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