STRINGSTRING
carB protein (Nocardioides sp. JS614) - STRING interaction network
"carB" - Carbamoyl-phosphate synthase large subunit in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
carBCarbamoyl-phosphate synthase large subunit (1143 aa)    
Predicted Functional Partners:
carA
Carbamoyl phosphate synthase small subunit (378 aa)
  0.999
pyrB
Aspartate carbamoyltransferase catalytic subunit (324 aa)
  0.999
Noca_1631
Aspartate carbamoyltransferase (317 aa)
  0.999
Noca_1033
Aspartate carbamoyltransferase (291 aa)
  0.999
pyrC
Dihydroorotase (432 aa)
  0.999
Noca_2425
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (334 aa)
 
  0.998
Noca_2472
Ornithine carbamoyltransferase; Reversibly catalyzes the transfer of the carbamoyl group from carbamoyl phosphate (CP) to the N(epsilon) atom of ornithine (ORN) to produce L-citrulline (306 aa)
 
  0.997
argG
Argininosuccinate synthase (477 aa)
 
  0.996
Noca_1632
Ornithine carbamoyltransferase (327 aa)
 
  0.994
pyrF
Orotidine 5’-phosphate decarboxylase (273 aa)
   
  0.990
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (10%) [HD]