STRINGSTRING
Noca_2443 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2443" - Fmu in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
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Gene Fusion
Cooccurence
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[Homology]
Score
Noca_2443Fmu (Sun) domain-containing protein (472 aa)    
Predicted Functional Partners:
Noca_2989
30S ribosomal protein S1 (490 aa)
     
 
  0.906
rpmD
50S ribosomal protein L30 (60 aa)
     
 
  0.896
rplJ
50S ribosomal protein L10; Forms part of the ribosomal stalk, playing a central role in the interaction of the ribosome with GTP-bound translation factors (228 aa)
     
      0.849
ksgA
Dimethyladenosine transferase; Specifically dimethylates two adjacent adenosines (A1518 and A1519) in the loop of a conserved hairpin near the 3’-end of 16S rRNA in the 30S particle. May play a critical role in biogenesis of 30S subunits (297 aa)
 
 
  0.843
truB
tRNA pseudouridine synthase B; Responsible for synthesis of pseudouridine from uracil- 55 in the psi GC loop of transfer RNAs (289 aa)
 
 
  0.825
guaA
GMP synthase; Catalyzes the synthesis of GMP from XMP (527 aa)
   
        0.818
fmt
methionyl-tRNA formyltransferase; Modifies the free amino group of the aminoacyl moiety of methionyl-tRNA(fMet). The formyl group appears to play a dual role in the initiator identity of N-formylmethionyl-tRNA by- (I) promoting its recognition by IF2 and (II) impairing its binding to EFTu-GTP (316 aa)
 
   
  0.783
Noca_3645
Inosine-5’-monophosphate dehydrogenase (500 aa)
   
      0.771
Noca_2608
Inosine 5-monophosphate dehydrogenase (478 aa)
   
      0.771
rplR
50S ribosomal protein L18; This is one of the proteins that binds and probably mediates the attachment of the 5S RNA into the large ribosomal subunit, where it forms part of the central protuberance (127 aa)
     
 
  0.765
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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