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Noca_2454 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2454" - Aldose 1-epimerase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2454Aldose 1-epimerase (307 aa)    
Predicted Functional Partners:
Noca_2607
Galactokinase (399 aa)
 
  0.996
Noca_3109
Glucokinase (313 aa)
       
  0.964
Noca_1808
Trehalose synthase (571 aa)
         
  0.962
Noca_3108
Glucokinase (335 aa)
       
  0.949
Noca_0116
Polyphosphate glucokinase (252 aa)
       
  0.948
Noca_2456
Hypothetical protein (411 aa)
 
          0.861
Noca_2455
Hypothetical protein (184 aa)
   
        0.842
Noca_2457
Hypothetical protein (148 aa)
              0.832
Noca_3398
Aldose 1-epimerase (294 aa)
   
   
 
0.820
Noca_2458
Hypothetical protein (175 aa)
              0.635
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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