STRINGSTRING
Noca_2494 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2494" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2494Hypothetical protein (115 aa)    
Predicted Functional Partners:
Noca_2493
Cobyrinic acid a,c-diamide synthase (367 aa)
         
  0.894
Noca_2497
Ribosomal large subunit pseudouridine synthase B (251 aa)
         
  0.894
Noca_2496
Condensin subunit ScpB; Participates in chromosomal partition during cell division. May act via the formation of a condensin-like complex containing Smc and ScpA that pull DNA away from mid-cell into both cell halves (241 aa)
         
  0.894
Noca_2495
Condensin subunit ScpA (309 aa)
         
  0.894
Noca_1508
UvrD/REP helicase (1060 aa)
   
          0.703
Noca_3295
Hypothetical protein (211 aa)
   
          0.684
Noca_3076
Hypothetical protein (153 aa)
   
          0.679
Noca_3369
Cytidine/deoxycytidylate deaminase/NUDIX/methyltransferase domain-containing protein (188 aa)
   
          0.675
Noca_2498
Hypothetical protein (173 aa)
              0.659
Noca_1202
Hypothetical protein (100 aa)
   
          0.618
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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