STRINGSTRING
cmk protein (Nocardioides sp. JS614) - STRING interaction network
"cmk" - Cytidylate kinase in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
cmkCytidylate kinase (243 aa)    
Predicted Functional Partners:
der
GTP-binding protein EngA; GTPase that plays an essential role in the late steps of ribosome biogenesis (461 aa)
   
  0.976
pyrF
Orotidine 5’-phosphate decarboxylase (273 aa)
   
 
    0.976
Noca_2500
Prephenate dehydrogenase (361 aa)
     
  0.976
ndk
Nucleoside diphosphate kinase; Major role in the synthesis of nucleoside triphosphates other than ATP. The ATP gamma phosphate is transferred to the NDP beta phosphate via a ping-pong mechanism, using a phosphorylated active-site intermediate (135 aa)
   
 
  0.972
Noca_3811
Vitamin B12-dependent ribonucleotide reductase (956 aa)
       
  0.968
upp
Uracil phosphoribosyltransferase; Catalyzes the conversion of uracil and 5-phospho-alpha- D-ribose 1-diphosphate (PRPP) to UMP and diphosphate (213 aa)
     
 
  0.966
pyrR
Bifunctional pyrimidine regulatory protein PyrR/uracil phosphoribosyltransferase; Also displays a weak uracil phosphoribosyltransferase activity which is not physiologically significant (204 aa)
       
  0.962
aroA
3-phosphoshikimate 1-carboxyvinyltransferase; Catalyzes the transfer of the enolpyruvyl moiety of phosphoenolpyruvate (PEP) to the 5-hydroxyl of shikimate-3- phosphate (S3P) to produce enolpyruvyl shikimate-3-phosphate and inorganic phosphate (430 aa)
   
 
  0.940
Noca_2989
30S ribosomal protein S1 (490 aa)
 
   
  0.938
pnp
Polynucleotide phosphorylase/polyadenylase; Involved in mRNA degradation. Catalyzes the phosphorolysis of single-stranded polyribonucleotides processively in the 3’- to 5’-direction (742 aa)
   
 
  0.919
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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