STRINGSTRING
Noca_2515 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2515" - Transposase, IS204/IS1001/IS1096/IS1165 family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2515Transposase, IS204/IS1001/IS1096/IS1165 family protein (432 aa)    
Predicted Functional Partners:
Noca_3806
ERCC4 domain-containing protein (330 aa)
   
          0.744
Noca_2516
acyl-CoA dehydrogenase domain-containing protein (370 aa)
              0.558
Noca_2517
acyl-CoA dehydrogenase domain-containing protein (395 aa)
              0.532
Noca_0139
Zinc finger SWIM domain-containing protein (226 aa)
   
        0.430
Noca_2520
Ferredoxin (366 aa)
              0.408
Noca_2519
Hypothetical protein (100 aa)
              0.408
Noca_2518
Rieske (2Fe-2S) domain-containing protein (398 aa)
              0.408
Noca_4018
ABC-type branched-chain amino acid transport systems periplasmic component-like (481 aa)
   
          0.403
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (7%) [HD]