STRINGSTRING
Noca_2523 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2523" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2523Hypothetical protein (242 aa)    
Predicted Functional Partners:
Noca_2522
Beta-lactamase domain-containing protein (230 aa)
         
  0.895
Noca_3102
Hypothetical protein (294 aa)
   
          0.667
uvrA
Excinuclease ABC subunit A; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. UvrA is an ATPase and a DNA-binding protein. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. When the presence of a lesion has been verified by UvrB, the UvrA molecules dissociate (1019 aa)
              0.655
Noca_0189
LuxR family transcriptional regulator (340 aa)
   
          0.586
Noca_2339
Major facilitator transporter (421 aa)
   
          0.584
Noca_1765
Hypothetical protein (149 aa)
   
          0.545
Noca_4675
Integral membrane protein (496 aa)
   
          0.540
Noca_2037
Hypothetical protein (154 aa)
   
          0.522
Noca_1915
Hypothetical protein (116 aa)
   
          0.509
Noca_4346
Helix-turn-helix, type 11 domain-containing protein (330 aa)
   
          0.497
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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