STRINGSTRING
Noca_2535 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2535" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2535Hypothetical protein (321 aa)    
Predicted Functional Partners:
Noca_4266
Hypothetical protein (350 aa)
   
          0.773
Noca_0927
Hypothetical protein (341 aa)
   
          0.752
Noca_2384
Hypothetical protein (331 aa)
   
          0.718
Noca_1451
Type 11 methyltransferase (523 aa)
   
          0.692
Noca_3499
HNH endonuclease (117 aa)
   
          0.683
Noca_3219
HNH endonuclease (427 aa)
   
          0.678
Noca_4290
ATPase domain-containing protein (315 aa)
   
          0.672
Noca_4682
Hypothetical protein (735 aa)
   
          0.668
Noca_2467
Hypothetical protein (266 aa)
   
          0.647
Noca_1810
Peptidase M36, fungalysin (1146 aa)
   
          0.629
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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