STRINGSTRING
Noca_2556 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2556" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2556Hypothetical protein (122 aa)    
Predicted Functional Partners:
Noca_2551
FeS assembly protein SufD (401 aa)
 
   
  0.974
Noca_2553
FeS assembly ATPase SufC (253 aa)
 
   
  0.967
Noca_2554
SufS subfamily cysteine desulfurase (428 aa)
 
   
  0.938
Noca_2555
NifU family SUF system FeS assembly protein (150 aa)
 
        0.926
Noca_2552
Rieske (2Fe-2S) domain-containing protein (116 aa)
              0.912
Noca_2550
FeS assembly protein SufB (472 aa)
 
   
  0.904
Noca_2549
Transcriptional regulator (240 aa)
   
   
  0.755
Noca_2557
Hypothetical protein (202 aa)
              0.640
Noca_1312
Cysteine synthase (320 aa)
 
   
    0.571
Noca_0939
Cystathionine beta-synthase (462 aa)
 
   
    0.560
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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