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Noca_2559 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2559" - ABC transporter-like protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2559ABC transporter-like protein (309 aa)    
Predicted Functional Partners:
Noca_2560
Putative ABC transporter (523 aa)
 
    0.986
Noca_2212
Putative ABC antibiotics transporter (528 aa)
 
    0.904
Noca_1666
Putative ABC antibiotics transporter (548 aa)
 
    0.904
Noca_2558
Transcriptional regulator TrmB (156 aa)
 
          0.877
Noca_0479
ABC transporter (245 aa)
  0.845
Noca_2561
Hypothetical protein (302 aa)
              0.840
Noca_1483
ABC transporter (269 aa)
  0.814
Noca_0121
ABC transporter (252 aa)
 
  0.812
Noca_2544
ABC transporter (265 aa)
   
  0.786
Noca_2543
Cytochrome oxidase assembly (305 aa)
       
    0.616
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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