STRINGSTRING
Noca_2566 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2566" - Membrane spanning protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2566Membrane spanning protein (304 aa)    
Predicted Functional Partners:
Noca_2543
Cytochrome oxidase assembly (305 aa)
 
 
  0.924
Noca_3136
Rieske (2Fe-2S) domain-containing protein (368 aa)
   
  0.842
ctaB
Protoheme IX farnesyltransferase; Converts heme B (protoheme IX) to heme O by substitution of the vinyl group on carbon 2 of heme B porphyrin ring with a hydroxyethyl farnesyl side group (314 aa)
 
 
  0.804
Noca_3176
Peptidase M16 domain-containing protein (453 aa)
   
      0.797
Noca_3135
Cytochrome c, class I (289 aa)
 
        0.765
Noca_3141
Cytochrome c oxidase subunit II; Subunits I and II form the functional core of the enzyme complex. Electrons originating in cytochrome c are transferred via heme a and Cu(A) to the binuclear center formed by heme a3 and Cu(B) (324 aa)
 
 
  0.763
Noca_0503
ResB family protein (532 aa)
   
        0.739
Noca_3139
Hypothetical protein; Part of cytochrome c oxidase, its function is unknown (132 aa)
   
          0.731
Noca_3134
Cytochrome c oxidase subunit III (215 aa)
 
   
  0.724
Noca_2909
Secreted protein (153 aa)
   
          0.714
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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