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Noca_2576 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2576" - ABC transporter-like protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2576ABC transporter-like protein (264 aa)    
Predicted Functional Partners:
Noca_0957
Periplasmic binding protein (282 aa)
   
 
    0.807
Noca_2574
Phosphoserine phosphatase (420 aa)
   
        0.802
Noca_2577
Hypothetical protein (153 aa)
              0.781
Noca_2579
Hypothetical protein (254 aa)
              0.728
Noca_2578
SPFH domain-containing protein/band 7 family protein (376 aa)
              0.728
Noca_2575
Hypothetical protein (245 aa)
              0.678
Noca_3390
Ketol-acid reductoisomerase (342 aa)
 
      0.581
Noca_2140
Ketol-acid reductoisomerase (342 aa)
 
      0.580
Noca_1952
ABC transporter-like protein (215 aa)
 
       
0.557
hemE
Uroporphyrinogen decarboxylase; Catalyzes the decarboxylation of four acetate groups of uroporphyrinogen-III to yield coproporphyrinogen-III (345 aa)
     
        0.493
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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