STRINGSTRING
Noca_2581 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2581" - Nitroreductase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2581Nitroreductase (236 aa)    
Predicted Functional Partners:
Noca_2580
Hypothetical protein (102 aa)
              0.636
Noca_4288
Thioesterase superfamily protein (229 aa)
   
          0.601
Noca_4152
Hypothetical protein (201 aa)
   
          0.543
Noca_4010
Hypothetical protein (148 aa)
   
          0.503
Noca_1720
Transposase IS116/IS110/IS902 family protein (409 aa)
   
          0.457
Noca_1720
Transposase IS116/IS110/IS902 family protein (409 aa)
   
          0.457
Noca_4369
Hypothetical protein (146 aa)
   
          0.438
Noca_0999
Hypothetical protein (135 aa)
   
          0.419
Noca_2812
Pyridoxamine 5’-phosphate oxidase-like protein (165 aa)
   
          0.406
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (6%) [HD]