STRINGSTRING
Noca_2585 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2585" - Short chain dehydrogenase in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2585Short chain dehydrogenase (259 aa)    
Predicted Functional Partners:
Noca_2586
Betaine-aldehyde dehydrogenase (459 aa)
 
  0.959
Noca_2587
L-glutamine synthetase (464 aa)
 
   
  0.944
Noca_2584
Peptidase C26 (237 aa)
 
          0.912
Noca_4562
Short chain enoyl-CoA hydratase / 3-hydroxyacyl-CoA dehydrogenase (736 aa)
   
  0.881
Noca_2854
3-hydroxyacyl-CoA dehydrogenase (696 aa)
   
  0.881
Noca_2588
GntR family transcriptional regulator (248 aa)
 
          0.870
Noca_2582
Hypothetical protein (330 aa)
   
        0.814
Noca_2583
Glycerophosphoryl diester phosphodiesterase (221 aa)
              0.796
Noca_2781
Dehydratase (282 aa)
 
  0.795
Noca_4135
Dehydratase (155 aa)
   
  0.753
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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