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Noca_2588 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2588" - GntR family transcriptional regulator in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2588GntR family transcriptional regulator (248 aa)    
Predicted Functional Partners:
Noca_2587
L-glutamine synthetase (464 aa)
 
          0.912
Noca_2586
Betaine-aldehyde dehydrogenase (459 aa)
 
   
  0.885
Noca_2585
Short chain dehydrogenase (259 aa)
 
          0.870
Noca_0850
GntR family transcriptional regulator (268 aa)
   
          0.771
Noca_0841
GntR family transcriptional regulator (246 aa)
   
          0.771
Noca_2584
Peptidase C26 (237 aa)
              0.758
Noca_0402
GntR family transcriptional regulator (239 aa)
   
 
  0.751
Noca_2589
Amino acid permease-associated protein (527 aa)
 
          0.728
Noca_0011
GntR family transcriptional regulator (249 aa)
   
          0.662
Noca_2590
Choline/ethanolamine kinase (305 aa)
              0.633
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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