STRINGSTRING
Noca_2592 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2592" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2592Hypothetical protein (140 aa)    
Predicted Functional Partners:
Noca_2591
FAD dependent oxidoreductase (826 aa)
              0.612
Noca_2590
Choline/ethanolamine kinase (305 aa)
              0.612
Noca_2589
Amino acid permease-associated protein (527 aa)
              0.612
Noca_3611
Hypothetical protein (169 aa)
   
          0.602
Noca_3628
Hypothetical protein (151 aa)
   
          0.544
Noca_0165
Cyclic nucleotide-binding protein (124 aa)
   
          0.541
Noca_3310
Regulatory protein LuxR (512 aa)
   
          0.518
Noca_3171
Carboxymuconolactone decarboxylase (201 aa)
   
          0.497
Noca_3125
Hypothetical protein (77 aa)
   
          0.497
Noca_2588
GntR family transcriptional regulator (248 aa)
              0.454
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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