STRINGSTRING
Noca_2620 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2620" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2620Hypothetical protein (413 aa)    
Predicted Functional Partners:
Noca_2621
Hypothetical protein (72 aa)
 
          0.711
Noca_0097
Regulator of polyketide synthase expression-like (524 aa)
   
          0.564
Noca_2622
Aldo/keto reductase (315 aa)
              0.556
Noca_2494
Hypothetical protein (115 aa)
   
          0.508
Noca_0182
Molybdopterin-guanine dinucleotide biosynthesis protein (205 aa)
   
          0.488
Noca_3431
Cobalt transport protein (374 aa)
   
          0.477
Noca_3710
Exopolysaccharide biosynthesis protein-like (420 aa)
   
          0.473
Noca_2687
YhhN family protein (223 aa)
   
          0.465
Noca_3051
N-acetyltransferase GCN5 (237 aa)
   
          0.464
Noca_0009
Plasmid pRiA4b ORF-3 family protein (472 aa)
   
          0.461
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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