STRINGSTRING
Noca_2670 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2670" - Major facilitator transporter in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2670Major facilitator transporter (458 aa)    
Predicted Functional Partners:
Noca_2671
Glycerophosphoryl diester phosphodiesterase (274 aa)
 
        0.923
Noca_2669
Hypothetical protein; Binds to RNA polymerase (RNAP), stimulating transcription from principal, but not alternative sigma factor promoters (128 aa)
              0.661
Noca_4506
Acetylornithine deacetylase (428 aa)
 
          0.473
Noca_2672
UDP-N-acetylglucosamine 1-carboxyvinyltransferase (508 aa)
              0.443
Noca_2708
Beta-lactamase (417 aa)
 
          0.431
Noca_2945
Type I phosphodiesterase/nucleotide pyrophosphatase (372 aa)
   
        0.425
Noca_3950
Secreted protein (907 aa)
   
          0.422
Noca_3758
Secreted protein (911 aa)
   
          0.408
Noca_1225
Glutamate dehydrogenase (1639 aa)
              0.407
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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