STRINGSTRING
Noca_2704 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2704" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2704Hypothetical protein (464 aa)    
Predicted Functional Partners:
Noca_2703
C69 family peptidase (514 aa)
 
          0.967
sbcC
Putative exonuclease; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (881 aa)
              0.745
sbcD
Exodeoxyribonuclease I subunit D; SbcCD cleaves DNA hairpin structures. These structures can inhibit DNA replication and are intermediates in certain DNA recombination reactions. The complex acts as a 3’->5’ double strand exonuclease that can open hairpins. It also has a 5’ single-strand endonuclease activity (386 aa)
              0.741
Noca_4229
Hypothetical protein (98 aa)
   
          0.645
Noca_0366
Type II secretion system protein (240 aa)
   
          0.607
Noca_1202
Hypothetical protein (100 aa)
   
          0.576
Noca_2700
Hypothetical protein (169 aa)
              0.561
Noca_1787
Hypothetical protein (255 aa)
   
          0.546
Noca_0865
Hypothetical protein (210 aa)
   
          0.531
Noca_1471
Integral membrane protein (100 aa)
   
          0.484
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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