STRINGSTRING
Noca_2705 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2705" - CHAD domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2705CHAD domain-containing protein (492 aa)    
Predicted Functional Partners:
Noca_2706
Hypothetical protein (116 aa)
              0.850
Noca_2707
Hypothetical protein (176 aa)
              0.587
Noca_3628
Hypothetical protein (151 aa)
   
          0.530
Noca_2674
Hypothetical protein (565 aa)
   
          0.491
Noca_1471
Integral membrane protein (100 aa)
   
          0.421
Noca_2835
Major facilitator transporter (428 aa)
   
          0.420
Noca_3611
Hypothetical protein (169 aa)
 
          0.416
Noca_2173
Regulatory protein TetR (200 aa)
   
          0.415
Noca_0344
Hypothetical protein (139 aa)
   
          0.413
Noca_0348
Hypothetical protein (120 aa)
   
          0.405
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (14%) [HD]