STRINGSTRING
Noca_2731 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2731" - Luciferase family protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2731Luciferase family protein (352 aa)    
Predicted Functional Partners:
Noca_1409
F420-dependent oxidoreductase (321 aa)
 
        0.791
Noca_1410
LPPG-FO 2-phospho-L-lactate transferase (337 aa)
 
          0.786
Noca_2732
Hypothetical protein (319 aa)
 
          0.738
Noca_1517
Transcription factor WhiB; Acts as a transcriptional regulator. Probably redox- responsive. The apo- but not holo-form probably binds DNA (107 aa)
   
          0.738
Noca_2733
Lipid-transfer protein (355 aa)
 
        0.726
Noca_2683
Luciferase family protein (298 aa)
   
          0.720
Noca_0856
Coenzyme F420-dependent N5 N10-methylene tetrahydromethanopterin reductase-like protein (356 aa)
   
          0.711
Noca_3625
Luciferase-like protein (202 aa)
   
          0.709
Noca_0172
Hypothetical protein (155 aa)
   
          0.707
Noca_2734
acetyl-CoA acetyltransferase (388 aa)
 
        0.700
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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