STRINGSTRING
Noca_0581 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0581" - Integrase catalytic subunit in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0581Integrase catalytic subunit (517 aa)    
Predicted Functional Partners:
Noca_0582
IstB ATP binding domain-containing protein (259 aa)
 
     
  0.980
Noca_0582
IstB ATP binding domain-containing protein (259 aa)
 
     
  0.866
Noca_2755
Hypothetical protein (306 aa)
              0.564
Noca_2754
Hypothetical protein (526 aa)
              0.494
Noca_4153
Hypothetical protein (863 aa)
   
          0.472
Noca_4117
Extracellular ligand-binding receptor (391 aa)
   
          0.468
Noca_2153
Transposase IS3/IS911 family protein (127 aa)
 
          0.461
Noca_3470
Bifunctional folylpolyglutamate synthase/ dihydrofolate synthase (460 aa)
       
      0.452
Noca_0630
Transposase, mutator type (361 aa)
 
          0.425
Noca_0099
Sugar ABC transporter periplasmic component-like protein (400 aa)
   
          0.410
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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