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Noca_0582 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_0582" - IstB ATP binding domain-containing protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_0582IstB ATP binding domain-containing protein (259 aa)    
Predicted Functional Partners:
Noca_0581
Integrase catalytic subunit (517 aa)
 
     
  0.980
Noca_4657
DnaB domain-containing protein; Participates in initiation and elongation during chromosome replication; it exhibits DNA-dependent ATPase activity (824 aa)
     
 
  0.875
Noca_0581
Integrase catalytic subunit (517 aa)
 
     
  0.866
Noca_3006
DNA polymerase I (889 aa)
   
   
  0.782
dnaA
Chromosomal replication initiator protein DnaA; Plays an important role in the initiation and regulation of chromosomal replication. Binds to the origin of replication; it binds specifically double-stranded DNA at a 9 bp consensus (dnaA box)- 5’-TTATC[CA]A[CA]A-3’. DnaA binds to ATP and to acidic phospholipids (528 aa)
     
 
  0.647
Noca_0630
Transposase, mutator type (361 aa)
 
          0.596
Noca_2755
Hypothetical protein (306 aa)
              0.564
Noca_2754
Hypothetical protein (526 aa)
              0.494
Noca_2842
5’-3’ exonuclease (289 aa)
   
   
  0.487
Noca_2659
5’-3’ exonuclease (301 aa)
   
   
  0.487
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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