STRINGSTRING
Noca_2765 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2765" - Regulatory protein TetR in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2765Regulatory protein TetR (210 aa)    
Predicted Functional Partners:
Noca_2767
acyl-CoA dehydrogenase domain-containing protein (378 aa)
 
        0.903
Noca_2766
Short chain dehydrogenase (260 aa)
 
          0.901
Noca_2764
acetyl-CoA acetyltransferase (387 aa)
   
        0.870
Noca_2770
acyl-CoA dehydrogenase domain-containing protein (289 aa)
 
        0.826
Noca_2769
acyl-CoA dehydrogenase domain-containing protein (393 aa)
 
        0.792
Noca_2768
AMP-dependent synthetase and ligase (489 aa)
 
          0.712
Noca_2771
acyl-CoA dehydrogenase domain-containing protein (323 aa)
 
          0.699
Noca_2787
Dehydratase (126 aa)
   
          0.632
Noca_2732
Hypothetical protein (319 aa)
   
          0.623
Noca_2733
Lipid-transfer protein (355 aa)
   
          0.555
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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