STRINGSTRING
Noca_2788 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2788" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2788Hypothetical protein (132 aa)    
Predicted Functional Partners:
Noca_2789
Hypothetical protein (177 aa)
          0.995
Noca_2787
Dehydratase (126 aa)
          0.993
Noca_2786
Lipid-transfer protein (394 aa)
 
    0.988
Noca_4071
Thiolase (382 aa)
     
  0.877
Noca_0844
Thiolase (384 aa)
     
  0.877
Noca_2790
acyl-CoA dehydrogenase domain-containing protein (743 aa)
 
          0.859
Noca_2744
Coenzyme A transferase (293 aa)
 
   
    0.815
Noca_0941
Lipid-transfer protein (398 aa)
     
  0.772
Noca_2734
acetyl-CoA acetyltransferase (388 aa)
          0.771
Noca_2733
Lipid-transfer protein (355 aa)
 
        0.761
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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