STRINGSTRING
Noca_2798 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2798" - Type 11 methyltransferase in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2798Type 11 methyltransferase (249 aa)    
Predicted Functional Partners:
Noca_2799
Group 1 glycosyl transferase (421 aa)
 
          0.971
Noca_2797
Hypothetical protein (384 aa)
 
          0.971
Noca_2796
Hypothetical protein (222 aa)
 
          0.798
Noca_2800
TetR family transcriptional regulator (201 aa)
              0.569
Noca_0426
Dihydrodipicolinate reductase (373 aa)
   
          0.529
Noca_1148
Hypothetical protein (268 aa)
   
          0.503
Noca_2801
Hypothetical protein (73 aa)
              0.470
Noca_1983
Alpha/beta hydrolase fold protein (310 aa)
   
          0.454
Noca_3208
Hypothetical protein (79 aa)
   
          0.412
Noca_3883
Methionine aminopeptidase; Removes the N-terminal methionine from nascent proteins. The N-terminal methionine is often cleaved when the second residue in the primary sequence is small and uncharged (Met-Ala-, Cys, Gly, Pro, Ser, Thr, or Val). Requires deformylation of the N(alpha)-formylated initiator methionine before it can be hydrolyzed (272 aa)
              0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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