STRINGSTRING
Noca_2815 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2815" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2815Hypothetical protein (63 aa)    
Predicted Functional Partners:
Noca_2812
Pyridoxamine 5’-phosphate oxidase-like protein (165 aa)
 
          0.952
Noca_2814
Short-chain dehydrogenase/reductase SDR (309 aa)
 
          0.887
Noca_2813
Short-chain dehydrogenase/reductase SDR (251 aa)
              0.863
Noca_2816
FAD-dependent pyridine nucleotide-disulfide oxidoreductase (330 aa)
              0.850
Noca_2819
Virulence factor Mce family protein (422 aa)
              0.659
Noca_2824
Virulence factor Mce family protein (436 aa)
              0.655
Noca_2823
Virulence factor Mce family protein (361 aa)
              0.651
Noca_2822
Virulence factor Mce family protein (329 aa)
              0.651
Noca_2821
Virulence factor Mce family protein (404 aa)
              0.651
Noca_2820
Virulence factor Mce family protein (436 aa)
              0.651
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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