STRINGSTRING
Noca_2838 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2838" - Phospholipase D/transphosphatidylase in Nocardioides sp. JS614
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query proteins and first shell of interactors
white nodes:
second shell of interactors
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proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2838Phospholipase D/transphosphatidylase (419 aa)    
Predicted Functional Partners:
uvrB
Excinuclease ABC subunit B; The UvrABC repair system catalyzes the recognition and processing of DNA lesions. A damage recognition complex composed of 2 UvrA and 2 UvrB subunits scans DNA for abnormalities. Upon binding of the UvrA(2)B(2) complex to a putative damaged site, the DNA wraps around one UvrB monomer. DNA wrap is dependent on ATP binding by UvrB and probably causes local melting of the DNA helix, facilitating insertion of UvrB beta-hairpin between the DNA strands. Then UvrB probes one DNA strand for the presence of a lesion. If a lesion is found the UvrA subunits dissociate [...] (706 aa)
              0.656
Noca_2836
Hypothetical protein (145 aa)
              0.652
acpP
Phosphopantetheine-binding protein; Carrier of the growing fatty acid chain in fatty acid biosynthesis (81 aa)
       
 
  0.638
Noca_3272
Thioesterase superfamily protein (149 aa)
   
      0.586
Noca_1373
Thioesterase superfamily protein (283 aa)
   
      0.586
Noca_3239
Phosphatidate cytidylyltransferase (308 aa)
   
 
  0.580
Noca_2059
Undecaprenyl-diphosphatase (204 aa)
     
 
  0.495
Noca_1553
Undecaprenyl-diphosphatase (207 aa)
     
 
  0.495
Noca_4450
Sigma-70 region 4 domain-containing protein (300 aa)
       
  0.478
Noca_1118
FliA/WhiG family RNA polymerase sigma factor (244 aa)
       
  0.478
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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