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Noca_2839 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2839" - Carboxymuconolactone decarboxylase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2839Carboxymuconolactone decarboxylase (187 aa)    
Predicted Functional Partners:
Noca_2840
Short chain dehydrogenase (302 aa)
 
          0.900
Noca_2841
Hypothetical protein (313 aa)
              0.859
Noca_1011
4-carboxymuconolactone decarboxylase (402 aa)
       
  0.720
rplQ
50S ribosomal protein L17 (202 aa)
     
        0.570
Noca_1929
Alpha/beta hydrolase fold protein (274 aa)
 
   
    0.527
Noca_1363
Cupin (118 aa)
   
          0.507
Noca_2842
5’-3’ exonuclease (289 aa)
              0.487
Noca_4559
Prolyl aminopeptidase 2 (421 aa)
       
    0.463
Noca_1790
Alpha/beta hydrolase fold protein (268 aa)
       
    0.463
Noca_0901
Alpha/beta hydrolase fold protein (360 aa)
       
    0.463
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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