STRINGSTRING
Noca_2843 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2843" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2843Hypothetical protein (338 aa)    
Predicted Functional Partners:
Noca_2844
Hypothetical protein (102 aa)
              0.752
lig
ATP-dependent DNA ligase; DNA ligase that seals nicks in double-stranded DNA during DNA replication, DNA recombination and DNA repair (509 aa)
              0.565
Noca_2842
5’-3’ exonuclease (289 aa)
              0.557
Noca_2420
Hypothetical protein (278 aa)
   
          0.509
Noca_2846
Regulatory protein TetR (227 aa)
              0.416
Noca_4589
Diacylglycerol kinase catalytic subunit (307 aa)
              0.408
Noca_2655
Diacylglycerol kinase catalytic subunit (291 aa)
              0.408
Noca_0173
PA-phosphatase-like phosphoesterase (506 aa)
              0.408
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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