STRINGSTRING
Noca_2861 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2861" - NUDIX hydrolase in Nocardioides sp. JS614
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
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Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2861NUDIX hydrolase (142 aa)    
Predicted Functional Partners:
Noca_2862
Glycoside hydrolase family protein (329 aa)
              0.648
Noca_2863
Transcriptional activator domain-containing protein (1132 aa)
              0.600
Noca_3585
Hypothetical protein (422 aa)
   
          0.560
Noca_0189
LuxR family transcriptional regulator (340 aa)
   
          0.538
Noca_1789
Secreted protein (248 aa)
   
          0.535
Noca_2860
Strictosidine synthase (307 aa)
              0.506
dxs
1-deoxy-D-xylulose-5-phosphate synthase; Catalyzes the acyloin condensation reaction between C atoms 2 and 3 of pyruvate and glyceraldehyde 3-phosphate to yield 1-deoxy-D-xylulose-5-phosphate (DXP) (634 aa)
              0.489
Noca_1810
Peptidase M36, fungalysin (1146 aa)
   
          0.484
Noca_2858
Hypothetical protein (402 aa)
              0.474
Noca_3586
Hypothetical protein (609 aa)
   
          0.458
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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