STRINGSTRING
Noca_2917 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2917" - Short chain dehydrogenase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2917Short chain dehydrogenase (665 aa)    
Predicted Functional Partners:
Noca_3706
Diacylglycerol O-acyltransferase (472 aa)
   
   
  0.790
Noca_2792
Diacylglycerol O-acyltransferase (488 aa)
   
   
  0.782
Noca_1669
Diacylglycerol O-acyltransferase (490 aa)
   
   
  0.780
Noca_1396
Diacylglycerol O-acyltransferase (458 aa)
   
   
  0.770
Noca_3479
PGAP1 family protein (378 aa)
   
          0.763
Noca_1218
Diacylglycerol O-acyltransferase (483 aa)
   
   
  0.756
Noca_3995
Alpha/beta hydrolase fold protein (465 aa)
   
          0.685
Noca_2916
DNA-binding protein (318 aa)
              0.681
Noca_3562
Cytochrome P450 (451 aa)
   
    0.666
Noca_0122
Alkane 1-monooxygenase (481 aa)
   
          0.644
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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