STRINGSTRING
Noca_2938 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2938" - ATPase domain-containing protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2938ATPase domain-containing protein (361 aa)    
Predicted Functional Partners:
Noca_2939
Response regulator receiver (232 aa)
  0.989
Noca_0312
Response regulator receiver (233 aa)
  0.924
Noca_3782
Response regulator receiver (297 aa)
  0.921
Noca_4454
Dehydrogenase, E1 component (726 aa)
   
  0.920
Noca_3500
Response regulator receiver (356 aa)
  0.918
Noca_4519
Response regulator receiver (234 aa)
  0.903
Noca_3261
Response regulator receiver (295 aa)
  0.899
Noca_2050
Response regulator receiver (250 aa)
  0.898
Noca_3695
Response regulator receiver (236 aa)
  0.898
Noca_1433
Response regulator receiver (248 aa)
  0.894
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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