STRINGSTRING
Noca_2966 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2966" - Glycosyl transferase family protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2966Glycosyl transferase family protein (408 aa)    
Predicted Functional Partners:
Noca_2965
Regulatory protein TetR (192 aa)
            0.882
Noca_2964
HhH-GPD family protein (188 aa)
              0.652
acsA
acetyl-CoA synthetase; Catalyzes the conversion of acetate into acetyl-CoA (AcCoA), an essential intermediate at the junction of anabolic and catabolic pathways. AcsA undergoes a two-step reaction. In the first half reaction, AcsA combines acetate with ATP to form acetyl-adenylate (AcAMP) intermediate. In the second half reaction, it can then transfer the acetyl group from AcAMP to the sulfhydryl group of CoA, forming the product AcCoA (664 aa)
   
 
  0.557
Noca_0860
AMP-dependent synthetase and ligase (541 aa)
     
 
  0.552
Noca_0969
Hypothetical protein (806 aa)
   
          0.533
Noca_4355
Succinyldiaminopimelate aminotransferase (385 aa)
       
      0.517
Noca_1193
N-succinyldiaminopimelate aminotransferase (285 aa)
       
      0.517
Noca_0295
Aspartate aminotransferase (393 aa)
       
      0.517
Noca_4358
Pentapeptide repeat-containing protein (264 aa)
   
          0.446
Noca_4444
FAD dependent oxidoreductase (523 aa)
   
   
  0.440
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (7%) [HD]