STRINGSTRING
Noca_2993 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_2993" - NAD-dependent epimerase/dehydratase in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_2993NAD-dependent epimerase/dehydratase (346 aa)    
Predicted Functional Partners:
Noca_2995
UDP-glucose/GDP-mannose dehydrogenase (399 aa)
 
  0.993
Noca_2994
Glycosyl transferase family protein (256 aa)
 
 
  0.990
Noca_4212
UDP-glucose/GDP-mannose dehydrogenase (433 aa)
 
  0.830
Noca_4579
UDP-glucose 6-dehydrogenase (440 aa)
 
 
  0.811
Noca_4184
Polysaccharide biosynthesis protein CapD (610 aa)
 
 
  0.791
Noca_4203
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (340 aa)
   
  0.785
Noca_4182
NAD-dependent epimerase/dehydratase (317 aa)
   
  0.785
Noca_4181
GDP-mannose 4,6-dehydratase; Catalyzes the conversion of GDP-D-mannose to GDP-4- dehydro-6-deoxy-D-mannose (326 aa)
   
  0.785
Noca_0456
Glycosyl transferase family protein (370 aa)
 
 
  0.768
Noca_4161
UDP-galactose 4-epimerase (334 aa)
 
0.757
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
Server load: low (11%) [HD]