STRINGSTRING
Noca_3001 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3001" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3001Hypothetical protein (555 aa)    
Predicted Functional Partners:
Noca_3002
Polysaccharide biosynthesis protein (435 aa)
 
          0.920
Noca_2998
Hypothetical protein (1342 aa)
 
        0.793
Noca_2996
Hypothetical protein (610 aa)
 
        0.793
Noca_3000
Group 1 glycosyl transferase (384 aa)
 
        0.776
Noca_2997
Acyltransferase 3 (409 aa)
 
          0.775
Noca_1916
FAD linked oxidase domain-containing protein (459 aa)
   
        0.771
Noca_2999
Type 11 methyltransferase (246 aa)
 
        0.765
Noca_2991
Hypothetical protein (320 aa)
   
          0.755
Noca_0397
Hypothetical protein (308 aa)
   
          0.748
Noca_0276
Hypothetical protein (161 aa)
   
          0.652
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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