STRINGSTRING
Noca_3019 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3019" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3019Hypothetical protein (244 aa)    
Predicted Functional Partners:
Noca_3958
Hypothetical protein (118 aa)
   
          0.735
Noca_3127
Hypothetical protein (88 aa)
   
          0.617
Noca_3018
Response regulator receiver (207 aa)
              0.574
Noca_4482
Hypothetical protein (389 aa)
   
          0.561
Noca_1771
Sulfate transporter/antisigma-factor antagonist STAS (102 aa)
   
          0.549
Noca_3290
Hypothetical protein (174 aa)
   
          0.478
Noca_3605
Integral membrane protein (118 aa)
   
          0.473
Noca_1787
Hypothetical protein (255 aa)
   
          0.471
Noca_3989
HAD family hydrolase; Removes the phosphate from trehalose 6-phosphate to produce free trehalose (281 aa)
   
          0.462
Noca_2801
Hypothetical protein (73 aa)
   
          0.459
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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