STRINGSTRING
Noca_3029 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3029" - Hypothetical protein in Nocardioides sp. JS614
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3029Hypothetical protein (127 aa)    
Predicted Functional Partners:
Noca_3030
Mambrane protein (66 aa)
              0.630
Noca_3447
Integral membrane protein (200 aa)
   
          0.575
Noca_2684
Hypothetical protein (245 aa)
   
          0.566
Noca_0308
Hypothetical protein (482 aa)
   
          0.537
Noca_2818
Hypothetical protein (176 aa)
   
          0.510
Noca_2504
Hypothetical protein (243 aa)
   
          0.497
Noca_3031
Hypothetical protein (181 aa)
              0.484
hisI
phosphoribosyl-AMP cyclohydrolase; Catalyzes the hydrolysis of the adenine ring of phosphoribosyl-AMP (123 aa)
              0.482
Noca_3373
GntR family transcriptional regulator (478 aa)
   
          0.474
Noca_0661
Hypothetical protein (282 aa)
   
          0.471
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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