STRINGSTRING
Noca_3115 protein (Nocardioides sp. JS614) - STRING interaction network
"Noca_3115" - Flp pilus assembly protein ATPase CpaE-like in Nocardioides sp. JS614
Nodes:
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splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
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colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
some 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
Noca_3115Flp pilus assembly protein ATPase CpaE-like (395 aa)    
Predicted Functional Partners:
Noca_3116
Type II secretion system protein E (491 aa)
 
          0.971
Noca_3117
Type II secretion system protein (326 aa)
 
          0.963
Noca_3114
SAF domain-containing protein (244 aa)
 
          0.962
Noca_3118
Type II secretion system protein (304 aa)
 
          0.961
ftsZ
Cell division protein FtsZ; Essential cell division protein that forms a contractile ring structure (Z ring) at the future cell division site. The regulation of the ring assembly controls the timing and the location of cell division. One of the functions of the FtsZ ring is to recruit other cell division proteins to the septum to produce a new cell wall between the dividing cells. Binds GTP and shows GTPase activity (401 aa)
   
 
  0.840
Noca_3119
ATPase domain-containing protein (535 aa)
         
  0.797
Noca_3120
Response regulator receiver (212 aa)
              0.796
Noca_3452
Ribonuclease G (1070 aa)
     
 
  0.764
Noca_1252
Type II secretion system protein E (435 aa)
 
          0.728
Noca_0364
Type II secretion system protein E (387 aa)
 
          0.705
Your Current Organism:
Nocardioides sp. JS614
NCBI taxonomy Id: 196162
Other names: N. sp. JS614, Nocardioides, Nocardioides JS614, Nocardioides sp. JS614
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